- IMAGEJ APPLE MAC OS X DOWNLOAD INSTALL
- IMAGEJ APPLE MAC OS X DOWNLOAD PRO
- IMAGEJ APPLE MAC OS X DOWNLOAD MAC
IMAGEJ APPLE MAC OS X DOWNLOAD MAC
These are the files you require to process NDVI images shot with the Peau Productions Blue+NIR single camera NDVI lens or Mapir NDVI camera on a Mac So from where I sit, a universal imagej-macosx for Fiji with native JRE inside is the best for Apple Silicon Macs, but all cases work fine, as long as a system Java exists.Fiji for OS X with NDVI Plugin Fiji (ImageJ) with Photo Monitoring Plugin for NDVI (Mac OS X) While adoptopen vs 1_zulu uses the included zulu.) So adoptopen vs zulu results in wrong architecture error and system java. (Also, if anyone is curious, if you put both an x86 and arm64 JRE in Fiji.app/java it's alphabetical. Normal launch (<4 s), no issues, 1 Fiji in dock my universal imagej-macosx (x86/arm64), with native Azul 11 JRE inside Fiji.app: System Java fallback, launches Fiji, No issues. my universal imagej-macosx (x86/arm64), with no JRE: Wrong architecture error, system Java fallback, launches Fiji, No issues. my universal imagej-macosx (x86/arm64), with current official JRE (x86):
current official imagej-macosx (x86), with native JRE inside Fiji.app (Azul 11 in my case):
Launches Fiji after fallback to System Java. current official imagej-macosx (x86), with no JRE and native system Java (Azul 11 in my case): current official imagej-macosx (x86), with current official JRE (x86):Ģ. It works fine with the following behavior when launched from the command line to monitor errors (there's some warnings too regarding patcher/injector, but they seem of no issue):ġ. I've tested this binary on my Apple Silicon M1 Mac. ~/dev/imagej-launcher > lipo -info ImageJ-macosxĪrchitectures in the fat file: ImageJ-macosx are: x86_64 arm64` The project compiled with no issue and the binary is universal: I also had some Java path issues, which may be a Big Sur thing. I made a fork () and tweaked CMakeLists.txt to provide the two arch for cmake (to make a universal binary). This is also supported by cmake, which I was pleased to see is used by the imagej-launcher. It does report an architecture mismatch error and does a fallback to system Java, which results in a 2nd Fiji icon in the dock-minor inconvenience.Īs noted in the thread, Apple docs show you can build for a different architecture than you run (can't test obviously) and can build universal binaries. Non-fat file: ImageJ-macosx is architecture: x86_64 Applications/Fiji.app/Contents/MacOS> lipo -info ImageJ-macosx The existing launcher actually works-despite being x86.
IMAGEJ APPLE MAC OS X DOWNLOAD INSTALL
(The normal Mac OS install also works fine in Rosetta, but is markedly slower.) I have Azul 11, but native OpenJDK is also available via homebrew, and use of the "No JRE" Fiji. So for Fiji/imagej the key is native JRE. … I've started a image.sc thread regarding getting things to work smoothly *native* rather than in Rosetta emulation.Įverything works when architectures are matched, so everything emulated or everything native.
IMAGEJ APPLE MAC OS X DOWNLOAD PRO
I've been using Fiji on an Apple Silicon M1 (arm64) MacBook Pro (Big Sur 11.4) Non-fat file: libclij2fft.dylib is architecture: arm64 Ld: warning: directory not found for option '-L/Users/haase/code/ops-experiments/ops-experiments-opencl/native'īut I'm not sure what I need to do next? I don't have a libjniclij2fftWrapper.dylibĮdit: I think it did work? The dylib does seem to be arm64 anyways. Linking CXX shared library libclij2fft.dylib Build files have been written to: /Users/piotrsobolewski/Dev/clij2-fft/native/clij2fft/cppbuild Then in 'clij2-fft/native' I ran which seemed to succeed: (I ran into an not obvious snag with a comment line, but got it resolved). Then I edited the second cppbuild.sh to replace the hard path to the path where clFFT is installed by homebrew (/opt/homebrew/opt/clfft/lib). I edited clij-fft/cppbuild.sh to account for arm64-to be consistent with cmake env variables. I really don't understand the structure with the two different cppbuild.sh.Īnyhow, I installed clFFT native arm64 for Big Sur from homebrew.
I made a fork () and took a look at the scripts.
So I thought instead of doing real work, I would try to contribute here and build it, as I had once done for JOCL. Applications/Fiji.app/lib/macosx/libjniclij2fftWrapper.dylib: mach-o, but wrong architecture `: : /Applications/Fiji.app/lib/macosx/libjniclij2fftWrapper.dylib: dlopen(/Applications/Fiji.app/lib/macosx/libjniclij2fftWrapper.dylib, 1): no suitable image found. Predictably, it failed to architecture mismatch: I tried running Ext.CLIJx_deconvolveRichardsonLucyFFT() on my MBP with Apple Sil … icon M1 (MacOS 11.4)
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